TY - GEN AB - Success as a biomedical scientist depends on publishing relevant findings to answer a biological question. A scientist needs to publish as frequently as possible in as many prestigious outlets as possible to meet certain requirements set forth by the institution to stay afloat in the hypercompetitive environment for obtaining grant funding. However, publication bias can be detrimental to the reproducibility and replicability of a study. It can also disrupt the self-correcting mechanism of the scientific method. Publication bias can lead to a lack of transparency within the study where an unpublished neutral or negative result could be necessary for another scientist to reproduce and extend the original idea. This bias has contributed to an uncomfortable trend within all scientific communities; that all novel, exciting, and innovative findings deserve more emphasis over reproducibility of the experiments or the methods. AD - Oregon Health and Science University AU - Hwee, Jason DA - 2015 DO - 10.6083/M49P30MQ DO - DOI ED - McWeeney, Shannon ED - Advisor ID - 2956 KW - Workflow KW - User-Computer Interface KW - Biomedical Engineering KW - Reproducibility of Results KW - Negative Results KW - Publishing KW - Publication Bias L1 - https://digitalcollections.ohsu.edu/record/2956/files/3730_etd.pdf L2 - https://digitalcollections.ohsu.edu/record/2956/files/3730_etd.pdf L4 - https://digitalcollections.ohsu.edu/record/2956/files/3730_etd.pdf LK - https://digitalcollections.ohsu.edu/record/2956/files/3730_etd.pdf N2 - Success as a biomedical scientist depends on publishing relevant findings to answer a biological question. A scientist needs to publish as frequently as possible in as many prestigious outlets as possible to meet certain requirements set forth by the institution to stay afloat in the hypercompetitive environment for obtaining grant funding. However, publication bias can be detrimental to the reproducibility and replicability of a study. It can also disrupt the self-correcting mechanism of the scientific method. Publication bias can lead to a lack of transparency within the study where an unpublished neutral or negative result could be necessary for another scientist to reproduce and extend the original idea. This bias has contributed to an uncomfortable trend within all scientific communities; that all novel, exciting, and innovative findings deserve more emphasis over reproducibility of the experiments or the methods. PB - Oregon Health and Science University PY - 2015 T1 - Evaluating virtualization and workflow management systems for biomedical applications to increase computational scientific reproducibility TI - Evaluating virtualization and workflow management systems for biomedical applications to increase computational scientific reproducibility UR - https://digitalcollections.ohsu.edu/record/2956/files/3730_etd.pdf Y1 - 2015 ER -