TY  - GEN
N2  - The field of microbiome research has grown exponentially in both popularity and importance over the past decade. Microbiome data consists of highly dimensional and complex information. Taxonomic abundance stacked bar plots are commonly used to provide a broad overview of microbiome data and to pinpoint specific taxa of interest for further analysis. These scientific plots use color to convey complex information, making interpretation difficult for those with CVD who cannot perceive the entire spectrum of color and struggle to differentiate between certain hues. Two of the most popular tools for microbiome data analysis are Bioconductor in R and QIIME 2 in Python. Although Bioconductor and QIIME 2 are widely used analysis tools, they do not give users the option to apply color palettes which are both CVD-accessible and include enough hues to guarantee that individual shades will be distinguishable.
DO  - 10.6083/bpxhc41606
DO  - doi
AB  - The field of microbiome research has grown exponentially in both popularity and importance over the past decade. Microbiome data consists of highly dimensional and complex information. Taxonomic abundance stacked bar plots are commonly used to provide a broad overview of microbiome data and to pinpoint specific taxa of interest for further analysis. These scientific plots use color to convey complex information, making interpretation difficult for those with CVD who cannot perceive the entire spectrum of color and struggle to differentiate between certain hues. Two of the most popular tools for microbiome data analysis are Bioconductor in R and QIIME 2 in Python. Although Bioconductor and QIIME 2 are widely used analysis tools, they do not give users the option to apply color palettes which are both CVD-accessible and include enough hues to guarantee that individual shades will be distinguishable.
AD  - Oregon Health and Science University
T1  - Colorblindness and scientific figures: evaluation of microshades color palette accessibility for color vision deficiency (CVD) in taxonomic stacked bar plots
ED  - Mooney, Michael
ED  - Bedrick, Steven
ED  - Totten, Annette
ED  - Collaborator
ED  - Collaborator
ED  - Collaborator
DA  - 2023-08-18
AU  - Rouhier, Alexandra
L1  - https://digitalcollections.ohsu.edu/record/41606/files/ResearchWeek.2023.Rouhier.Alexandra.pdf
PB  - Oregon Health and Science University
LA  - eng
PY  - 2023-08-18
ID  - 41606
L4  - https://digitalcollections.ohsu.edu/record/41606/files/ResearchWeek.2023.Rouhier.Alexandra.pdf
KW  - Mycobiome
KW  - Data Visualization
KW  - Color Vision Defects
KW  - Diversity, Equity, Inclusion
KW  - microshades
KW  - taxonomic abundance
KW  - CVD
KW  - colorblindness
KW  - accessibility
TI  - Colorblindness and scientific figures: evaluation of microshades color palette accessibility for color vision deficiency (CVD) in taxonomic stacked bar plots
Y1  - 2023-08-18
L2  - https://digitalcollections.ohsu.edu/record/41606/files/ResearchWeek.2023.Rouhier.Alexandra.pdf
LK  - https://digitalcollections.ohsu.edu/record/41606/files/ResearchWeek.2023.Rouhier.Alexandra.pdf
UR  - https://digitalcollections.ohsu.edu/record/41606/files/ResearchWeek.2023.Rouhier.Alexandra.pdf
ER  -