TY - GEN AB - This novel computational framework for the analysis of single-cell gene expression data from human tumor samples enables the identification of molecular activity associated with CD8 T cell exhaustion across multiple cell types. It also provides the capability to consider these changes in the context of immunotherapy response. Its application yielded new insights into potential mechanisms of resistance to immune checkpoint inhibitor therapies in cancer patients. AD - Oregon Health and Science University AU - Klocke, Christopher DA - 2024-09-18 DO - 10.6083/bpxhc43707 DO - doi ED - Moran, Amy ED - Adey, Andrew ED - McWeeney, Shannon ED - Wong, Melissa ED - Wu, Guanming ED - Committee member ED - Chair ED - Committee member ED - Committee member ED - Advisor ID - 43707 KW - T-Cell Exhaustion KW - Immunotherapy KW - Computational Biology KW - single-cell RNA-seq KW - cancer KW - treatment resistance L1 - https://digitalcollections.ohsu.edu/record/43707/files/fairusechecklist_dissertation.pdf L1 - https://digitalcollections.ohsu.edu/record/43707/files/Klocke.Christopher.2024.pdf L2 - https://digitalcollections.ohsu.edu/record/43707/files/fairusechecklist_dissertation.pdf L2 - https://digitalcollections.ohsu.edu/record/43707/files/Klocke.Christopher.2024.pdf L4 - https://digitalcollections.ohsu.edu/record/43707/files/fairusechecklist_dissertation.pdf L4 - https://digitalcollections.ohsu.edu/record/43707/files/Klocke.Christopher.2024.pdf LA - eng LK - https://digitalcollections.ohsu.edu/record/43707/files/fairusechecklist_dissertation.pdf LK - https://digitalcollections.ohsu.edu/record/43707/files/Klocke.Christopher.2024.pdf N2 - This novel computational framework for the analysis of single-cell gene expression data from human tumor samples enables the identification of molecular activity associated with CD8 T cell exhaustion across multiple cell types. It also provides the capability to consider these changes in the context of immunotherapy response. Its application yielded new insights into potential mechanisms of resistance to immune checkpoint inhibitor therapies in cancer patients. PB - Oregon Health and Science University PY - 2024-09-18 T1 - A novel computational framework for analyzing single-cell transcriptomics data: applications to T cell exhaustion and cancer immunotherapy response TI - A novel computational framework for analyzing single-cell transcriptomics data: applications to T cell exhaustion and cancer immunotherapy response UR - https://digitalcollections.ohsu.edu/record/43707/files/fairusechecklist_dissertation.pdf UR - https://digitalcollections.ohsu.edu/record/43707/files/Klocke.Christopher.2024.pdf Y1 - 2024-09-18 ER -